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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9860453_9861028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9860453 - 9861028

Intron Length:

576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

AAACAATTAAAT

Flanking Amino Acid:

TVGLYVGTGRARNIVCVRAD

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

73.8

0.59

0.9

26.8

Major PPT

0.86

0.7

80.3

31.7

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

46.9

-0.1

1.8

62.69

39.6

Associated Gene:

Gene:

TRMT2B

Ensembl Gene ID:

ENSAPLG00000013756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042468

9857976 - 9866624

8649

ENSAPLT00000014330

9857976 - 9866477

8502