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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9862944_9863387_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9862944 - 9863387

Intron Length:

444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACCCAA

U12 Branch Point Sequence:

TCTCTCTTAACA

Flanking Amino Acid:

VTFHPQQLGQEALATQKALL

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

55.3

0.13

1.2

64.7

33.6

Major PPT

80.6

0.69

0.8

76.8

30.4

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

77.8

0.87

1.1

80.35

35.4

Associated Gene:

Gene:

TRMT2B

Ensembl Gene ID:

ENSAPLG00000013756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042468

9857976 - 9866624

8649