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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9864464_9864636_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9864464 - 9864636

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAG

U12 Branch Point Sequence:

TTTTGCTTCACA

Flanking Amino Acid:

EDARWNAAFNGISNCEFHSG

Intron Amino Acid Position:

445

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

75.5

29.5

Major BPS

67.5

0.43

1.5

65.7

43.2

Major PPT

85.2

0.79

0.8

32.1

Minor 5ss

35.2

-1.7

2.8

38.4

40.8

Minor BPS

65.3

0.48

2.2

83.03

38.2

Associated Gene:

Gene:

TRMT2B

Ensembl Gene ID:

ENSAPLG00000013756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042468

9857976 - 9866624

8649

ENSAPLT00000014330

9857976 - 9866477

8502