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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9864757_9865430_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9864757 - 9865430

Intron Length:

674

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGAATA

5'SS Class:

major

3'SS Sequence:

TCTGCTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

TTGTTGGGAAAA

Flanking Amino Acid:

AVVNPSRAGIHYRVVRAIRN

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.3

73.5

37.2

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

78.6

0.64

0.9

72.4

37.7

Minor 5ss

38.6

-1.3

3.1

50.2

40.5

Minor BPS

39.5

-0.8

2.5

56.62

42.7

Associated Gene:

Gene:

TRMT2B

Ensembl Gene ID:

ENSAPLG00000013756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014330

9857976 - 9866477

8502

ENSAPLT00000042468

9857976 - 9866624

8649