Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_9874603_9874876_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9874603 - 9874876

Intron Length:

274

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TGTTTCATCACT

Flanking Amino Acid:

LEQAVKFFEKVQDRVSLKKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

83.9

0.76

0.6

78.2

30.7

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

57.2

0.31

81.33

40.1

Associated Gene:

Gene:

CENPI

Ensembl Gene ID:

ENSAPLG00000013427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019461

9874413 - 9890019

15607

ENSAPLT00000014005

9874284 - 9890019

15736