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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9912397_9912539_F


Intron Information:

Intron Rank:
5

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
9912397 - 9912539

Intron Length:
143

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTTGTG

5'SS Class:
major

3'SS Sequence:
CACGGGGCTGCAG|C

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TGGGCAC

U12 Branch Point Sequence:
TGTGCCTGCTCC

Flanking Amino Acid:
SLPEHIQSTKLFKDELSPMK

Intron Amino Acid Position:
264

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76
0.61
1.1
69.2
41.7

Major BPS
44
-0.3
1.5
48.8
46.3

Major PPT
55.8
0.13
1.1
45.8
41.2

Minor 5ss
35.3
-1.7
3.5
49.3
46.9

Minor BPS
37.1
-1
3.6
59.84
45

Associated Gene:

Gene:
DRP2

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9907354 - 9918920
11567

9910417 - 9918381
7965

9908984 - 9918177
9194

9908984 - 9918747
9764