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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9922447_9922779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9922447 - 9922779

Intron Length:

333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGTGC

5'SS Class:

major

3'SS Sequence:

TTCTCTCCCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCAGCAC

U12 Branch Point Sequence:

GCTGCAGCACCC

Flanking Amino Acid:

HTTELLQKHKDNAKAYFKRA

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.36

1.3

55.9

44.3

Major BPS

39.4

-0.6

1.3

39.4

40.4

Major PPT

81.6

0.71

0.7

77.1

24.9

Minor 5ss

41.6

-0.9

3.4

59.3

45.4

Minor BPS

34.6

-1.1

2.3

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023601

9921101 - 9925547

4447