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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9922922_9923030_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9922922 - 9923030

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTGGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCGTGAT

U12 Branch Point Sequence:

GCAGCCGTGATC

Flanking Amino Acid:

VICLRNLQAKEKPWEEGWLK

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.8

71.2

34.5

Major BPS

56.3

0.16

1.3

48.7

45.1

Major PPT

60.1

0.23

1.2

56.5

43.4

Minor 5ss

24.3

-3

3.1

29.7

43.1

Minor BPS

44.8

-0.4

2.1

50.35

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030086

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023601

9921101 - 9925547

4447