Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_9926533_9926617_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9926533 - 9926617

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAATTGG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

TAGGTCTCAGCT

Flanking Amino Acid:

QQENEGSNQIVMGIQKQIDN

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

68.2

39.6

Major BPS

0.28

1.1

63.1

35.8

Major PPT

84.6

0.78

0.7

76.4

32.2

Minor 5ss

33.5

-1.9

2.9

40.6

45.6

Minor BPS

47.6

-0.1

1.9

64.88

45.5

Associated Gene:

Gene:

TAF7

Ensembl Gene ID:

ENSAPLG00000012103

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012633

9925197 - 9930180

4984