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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9965420_9965676_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9965420 - 9965676

Intron Length:

257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGCT

5'SS Class:

strong_major

3'SS Sequence:

CGTCCCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

CCATTTCTAACC

Flanking Amino Acid:

SAGSRASLPKVSYVKAIDIW

Intron Amino Acid Position:

319

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.9

35.3

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

72.1

0.5

0.8

65.1

30.5

Minor 5ss

33.5

-1.9

3.4

47.6

Minor BPS

51.1

0.01

1.7

58.78

40.6

Associated Gene:

Gene:

GLRA4

Ensembl Gene ID:

ENSAPLG00000010996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018855

9963051 - 9969990

6940

ENSAPLT00000011445

9963051 - 9970346

7296