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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9966398_9966516_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9966398 - 9966516

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCCGCGG

5'SS Class:

weak_major

3'SS Sequence:

CTGCCCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAG

U12 Branch Point Sequence:

CTTTCAGTGAGC

Flanking Amino Acid:

FKNGNVLYSIRLTLILSCPM

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.2

0.19

1.2

42.4

46.2

Major BPS

63.7

0.34

1.6

39.9

Major PPT

72.3

0.5

0.8

62.2

34.7

Minor 5ss

29.2

-2.4

3.4

38.7

46.4

Minor BPS

44.5

-0.4

2.5

62.5

43.5

Associated Gene:

Gene:

GLRA4

Ensembl Gene ID:

ENSAPLG00000010996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018855

9963051 - 9969990

6940

ENSAPLT00000011445

9963051 - 9970346

7296