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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9966998_9967201_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9966998 - 9967201

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGCCAG

U12 Branch Point Sequence:

GCTGCGGGAGGT

Flanking Amino Acid:

YDARIRPNFKGPPVNVTCNI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

38.3

-0.7

1.7

43.9

48.6

Major PPT

81.6

0.71

0.9

72.6

42.4

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

-1.5

2.5

44.66

46.1

Associated Gene:

Gene:

GLRA4

Ensembl Gene ID:

ENSAPLG00000010996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011445

9963051 - 9970346

7296