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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9967336_9969490_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9967336 - 9969490

Intron Length:

2155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

CTCCGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAGAAA

U12 Branch Point Sequence:

AACGTCTGAGCG

Flanking Amino Acid:

GCLLPRRGPLRLVSGREEIK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

45.4

-0.2

1.4

42.2

Major PPT

68.4

0.41

0.8

61.3

29.1

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

43.6

-0.6

1.7

43.28

42.1

Associated Gene:

Gene:

GLRA4

Ensembl Gene ID:

ENSAPLG00000010996

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011445

9963051 - 9970346

7296

ENSAPLT00000018855

9963051 - 9969990

6940