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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9980177_9980341_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9980177 - 9980341

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CGCGGCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CCCGGCTCACCC

Flanking Amino Acid:

GTLCADARMYGVLPWNAFPG

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

52.1

0.05

1.3

41.8

Major PPT

60.7

0.24

0.9

49.6

39.3

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

38.5

-0.8

2.1

41.26

45.7

Associated Gene:

Gene:

PLP1

Ensembl Gene ID:

ENSAPLG00000010958

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011414

9978304 - 9981113

2810