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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9996725_9998254_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9996725 - 9998254

Intron Length:

1530

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAGCCCTG

5'SS Class:

major

3'SS Sequence:

TCTCGCAGGCAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAG

U12 Branch Point Sequence:

GGTACCCCAGCT

Flanking Amino Acid:

MLAEMCDKPDLSEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.52

1.2

58.1

46.4

Major BPS

47.4

-0.1

1.5

42.8

41.8

Major PPT

48.6

-0

1.2

45.4

40.5

Minor 5ss

35.3

-1.7

4.3

55.3

48.9

Minor BPS

44.4

-0.3

2.1

64.3

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017528

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020143

9996713 - 9998907

2195