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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10004398_10004767_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10004398 - 10004767

Intron Length:

370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAATGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATGACCT

Flanking Amino Acid:

TKIMEEGMGQTISCPAHGCD

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

36.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.4

0.98

0.7

92.3

26.6

Minor 5ss

-1.2

3.2

56.6

47.5

Minor BPS

54.4

0.22

81.73

39.5

Associated Gene:

Gene:

ARIH1

Ensembl Gene ID:

ENSAPLG00000016156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016876

9985341 - 10038861

53521