Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_10055801_10056153_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10055801 - 10056153

Intron Length:

353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TGTCGTGACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CCTTCCTCACTC

Flanking Amino Acid:

TPGHTQSWGPGAPDLLTPCY

Intron Amino Acid Position:

265

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

78.2

31.2

Major BPS

72.4

0.56

73.5

32.5

Major PPT

63.2

0.3

1.1

54.1

Minor 5ss

27.1

-2.6

42.4

Minor BPS

51.3

0.02

1.9

61.86

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017016

10048798 - 10059367

10570