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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10057146_10057554_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10057146 - 10057554

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GCTGCGGGTCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTGCAC

U12 Branch Point Sequence:

ACGGGCTCCACG

Flanking Amino Acid:

WQEVFDNRVKVRPDTIIHVW

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.8

77.7

30.1

Major BPS

-0

1.5

63.1

44.5

Major PPT

56.8

0.15

1.1

45.7

45.8

Minor 5ss

27.6

-2.6

3.3

39.2

46.2

Minor BPS

37.2

-1.1

2.3

37.03

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017016

10048798 - 10059367

10570