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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10067102_10068161_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10067102 - 10068161

Intron Length:

1060

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGCTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGGCAT

U12 Branch Point Sequence:

CCCTCGCCGACG

Flanking Amino Acid:

VKPADSEGRGEDRKLFVGML

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

46.9

-0.1

1.6

57.1

49.4

Major PPT

76.5

0.6

0.9

73.5

37.1

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

-1.1

2.4

38.99

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045191

10066636 - 10070875

4240

ENSAPLT00000017096

10066636 - 10071475

4840