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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10069793_10070462_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10069793 - 10070462

Intron Length:

670

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTCAAAC

5'SS Class:

weak_major

3'SS Sequence:

TCTGTTCCAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAG

U12 Branch Point Sequence:

GGTCTCAGCACC

Flanking Amino Acid:

QAYAGMQHYAAYPTAYAPIS

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.8

0.14

1.4

58.7

40.6

Major BPS

53.2

0.08

1.7

65.3

43.7

Major PPT

74.9

0.56

0.9

70.8

34.7

Minor 5ss

40.8

-1

2.7

52.3

44.5

Minor BPS

-0.7

51.34

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016374

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045191

10066636 - 10070875

4240

ENSAPLT00000017096

10066636 - 10071475

4840