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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10075523_10075940_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10075523 - 10075940

Intron Length:

418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCGCTGGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGCT

U12 Branch Point Sequence:

TTGCTCTTCCCT

Flanking Amino Acid:

SHIVKLPLSRQLKFMHTSHQ

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

71.1

40.4

Major BPS

33.3

-1

4.2

60.7

45.9

Major PPT

69.3

0.43

35.9

Minor 5ss

32.6

-2

3.1

35.3

41.4

Minor BPS

41.6

-0.5

3.6

72.43

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042344

10074445 - 10079026

4582

ENSAPLT00000024394

10073331 - 10079026

5696

ENSAPLT00000017162

10073331 - 10080395

7065