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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10076235_10076377_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10076235 - 10076377

Intron Length:

143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGGT

5'SS Class:

strong_major

3'SS Sequence:

GTGCCTCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

CTCACCTCCACC

Flanking Amino Acid:

SVMSIREMTQGSYLEIKKQM

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

77.9

36.9

Major BPS

72.7

0.56

30.1

Major PPT

65.5

0.35

1.1

43.1

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

47.8

-0.1

2.1

59.11

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042344

10074445 - 10079026

4582

ENSAPLT00000024394

10073331 - 10079026

5696

ENSAPLT00000017162

10073331 - 10080395

7065