Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_10076444_10076534_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10076444 - 10076534

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

GCCCCATGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

ACCCCTCTGACG

Flanking Amino Acid:

DPKTLAFNPKKKNYERLQKA

Intron Amino Acid Position:

365

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

69.1

0.47

60.7

37.6

Major PPT

64.2

0.32

57.1

37.6

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

-0.4

1.7

46.67

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042344

10074445 - 10079026

4582

ENSAPLT00000024394

10073331 - 10079026

5696

ENSAPLT00000017162

10073331 - 10080395

7065