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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10078157_10078402_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10078157 - 10078402

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

ACCTCTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACCCAT

U12 Branch Point Sequence:

CCCATGCCACCT

Flanking Amino Acid:

EGFGLGLQLKKILGMFTSQQ

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

75.3

32.6

Major BPS

52.1

0.05

1.2

62.1

35.8

Major PPT

69.4

0.44

65.2

35.6

Minor 5ss

34.8

-1.7

3.5

49.1

Minor BPS

30.3

-1.4

2.2

40.15

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042344

10074445 - 10079026

4582

ENSAPLT00000024394

10073331 - 10079026

5696

ENSAPLT00000017162

10073331 - 10080395

7065