Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_10078641_10078744_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10078641 - 10078744

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

TGTCCCTCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CTGGATCCAGCT

Flanking Amino Acid:

DLHVNISFLDEEVATAWKVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

67.9

37.3

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

70.1

0.45

65.9

35.9

Minor 5ss

32.5

-2

2.9

41.7

37.6

Minor BPS

35.7

-1

49.38

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017162

10073331 - 10080395

7065

ENSAPLT00000042344

10074445 - 10079026

4582

ENSAPLT00000024394

10073331 - 10079026

5696