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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10087302_10089586_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10087302 - 10089586

Intron Length:

2285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTGCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

GTAGATTAAAGT

Flanking Amino Acid:

RLNFSHGTHEYHEGTIKNVR

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

78.8

0.65

0.9

73.1

37.2

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

42.5

-0.4

2.1

57.91

Associated Gene:

Gene:

PKM

Ensembl Gene ID:

ENSAPLG00000001115

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029734

10086630 - 10100085

13456

ENSAPLT00000001300

10086362 - 10100085

13724