Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_10294180_10294294_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10294180 - 10294294

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATGGG

5'SS Class:

major

3'SS Sequence:

TATTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTT

Flanking Amino Acid:

TLERLIFHLVRIALQEETNR

Intron Amino Acid Position:

2143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

60.6

44.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

89.4

0.89

0.7

89.2

27.3

Minor 5ss

30.4

-2.2

3.4

40.6

45.6

Minor BPS

70.5

0.72

1.5

86.8

33.5

Associated Gene:

Gene:

MYO9A

Ensembl Gene ID:

ENSAPLG00000002464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024547

10151711 - 10300760

149050

ENSAPLT00000023888

10151711 - 10300760

149050

ENSAPLT00000019542

10151711 - 10300760

149050

ENSAPLT00000002540

10151633 - 10300760

149128

ENSAPLT00000038843

10151711 - 10300760

149050