Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_10303586_10303667_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10303586 - 10303667

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCCG

5'SS Class:

major

3'SS Sequence:

CTCTGTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

CCACCCACCACC

Flanking Amino Acid:

NRSHYPGQPVRFGKLLLLLP

Intron Amino Acid Position:

363

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

58.1

46.4

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

73.9

0.54

0.8

65.2

36.3

Minor 5ss

-2.3

3.4

39.4

Minor BPS

40.1

-0.7

2.1

45.88

42.4

Associated Gene:

Gene:

NR2E3

Ensembl Gene ID:

ENSAPLG00000003149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003190

10303453 - 10305979

2527