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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10305377_10305921_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10305377 - 10305921

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATCAC

U12 Branch Point Sequence:

ATCACCCCAAGC

Flanking Amino Acid:

VSAGLEDSPSGLSPAPGKAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

67.1

39.6

Major BPS

63.2

0.33

1.2

65.7

Major PPT

75.3

0.57

0.8

69.4

31.2

Minor 5ss

31.3

-2.1

3.3

34.9

41.1

Minor BPS

43.5

-0.5

2.1

54.69

42.9

Associated Gene:

Gene:

NR2E3

Ensembl Gene ID:

ENSAPLG00000003149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003190

10303453 - 10305979

2527