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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10309330_10313801_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10309330 - 10313801

Intron Length:

4472

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTT|GCAGATGAA

5'SS Class:

weak_major

3'SS Sequence:

CCACTGATGGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

CCTGCCCCACTG

Flanking Amino Acid:

VTVAPTMSVLSPLCPHSEVQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.4

39.8

Major BPS

71.2

0.53

37.5

Major PPT

59.2

0.21

1.1

53.8

Minor 5ss

22.2

-3.2

4.2

35.1

43.1

Minor BPS

38.2

-1

39.35

44.8

Associated Gene:

Gene:

AP3B2

Ensembl Gene ID:

ENSAPLG00000003156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035152

10309300 - 10319847

10548