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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10348984_10349233_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10348984 - 10349233

Intron Length:

250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCGG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTGTCCAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

CCTCCTCTGAGT

Flanking Amino Acid:

REARLHRQAAAVNEATCTWS

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.8

72.7

44.5

Major BPS

78.8

0.72

67.9

40.1

Major PPT

64.6

0.33

1.1

63.2

42.2

Minor 5ss

33.6

-1.9

2.9

41.4

Minor BPS

45.2

-0.2

1.9

60.73

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003525

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045659

10331317 - 10354284

22968

ENSAPLT00000003619

10325217 - 10354284

29068