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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10350807_10351665_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10350807 - 10351665

Intron Length:

859

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GCCTGCTGACCT

Flanking Amino Acid:

MSSRRMRCKEVQVIPWVLAD

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

68.8

43.8

Major BPS

66.3

0.4

1.1

41.8

Major PPT

84.3

0.77

0.9

81.2

36.5

Minor 5ss

33.3

-1.9

2.8

39.7

45.9

Minor BPS

45.3

-0.2

2.1

60.99

48.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003525

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045659

10331317 - 10354284

22968

ENSAPLT00000003619

10325217 - 10354284

29068