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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10351865_10353230_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10351865 - 10353230

Intron Length:

1366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

CTTGGTGTAATG

Flanking Amino Acid:

IDTDKHKYPIGSGRVTFNNQ

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

81.2

0.7

0.8

73.8

36.9

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

41.9

-0.7

2.4

49.65

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003525

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045659

10331317 - 10354284

22968

ENSAPLT00000003619

10325217 - 10354284

29068