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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10353326_10353529_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10353326 - 10353529

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCAAC

U12 Branch Point Sequence:

TTTGTGCCAACT

Flanking Amino Acid:

EIKTTKFTKKVQIDPYLEDS

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

48.7

-0

1.3

56.4

38.8

Major PPT

76.8

0.6

0.9

72.7

37.5

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

43.9

-0.3

2.5

72.26

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003525

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045659

10331317 - 10354284

22968

ENSAPLT00000003619

10325217 - 10354284

29068