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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10353611_10354173_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10353611 - 10354173

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCTT

5'SS Class:

strong_major

3'SS Sequence:

GCTCTCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CTGCCCTGACCG

Flanking Amino Acid:

QPGPFFCRDQICFKYFCRSC

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

75.3

40.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

72.1

0.5

0.8

64.9

30.8

Minor 5ss

36.8

-1.5

3.5

56.4

47.8

Minor BPS

-0.2

1.9

53.53

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003525

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045659

10331317 - 10354284

22968

ENSAPLT00000003619

10325217 - 10354284

29068