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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1036900_1038291_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1036900 - 1038291

Intron Length:

1392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

ACTCTGTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATATTTATAAAT

Flanking Amino Acid:

FLPSLEIISECLGLSQDVAG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

79.7

28.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.7

0.51

0.9

69.3

36.3

Minor 5ss

34.4

-1.8

3.3

44.6

43.6

Minor BPS

54.5

0.22

1.7

73.23

37.1

Associated Gene:

Gene:

SLC24A5

Ensembl Gene ID:

ENSAPLG00000009353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023002

1036135 - 1038658

2524

ENSAPLT00000009734

1036833 - 1044817

7985