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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1038376_1038464_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1038376 - 1038464

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

TGAACTGGAACA

Flanking Amino Acid:

SAPELVTAFLGVFVTKGDIG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

26.4

Major BPS

0.42

1.1

57.3

41.7

Major PPT

79.8

0.67

0.8

74.4

35.8

Minor 5ss

32.1

-2

3.5

46.6

48.7

Minor BPS

45.9

-0.3

2.1

58.82

40.4

Associated Gene:

Gene:

SLC24A5

Ensembl Gene ID:

ENSAPLG00000009353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023002

1036135 - 1038658

2524

ENSAPLT00000009734

1036833 - 1044817

7985