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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10386959_10387482_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

10386959 - 10387482

Intron Length:

524

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CCTTCTATGCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTAAT

U12 Branch Point Sequence:

CACTCCTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

74.6

0.61

1.1

75.5

35.1

Major PPT

67.8

0.4

62.2

38.5

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

0.93

1.2

80.78

41.5

Associated Gene:

Gene:

SNX1

Ensembl Gene ID:

ENSAPLG00000003989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004143

10382476 - 10392896

10421