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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10387562_10388287_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10387562 - 10388287

Intron Length:

726

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACAGATC

5'SS Class:

major

3'SS Sequence:

TTCCTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGTAAC

U12 Branch Point Sequence:

ACAGAGGTAACT

Flanking Amino Acid:

FLEKRRAALERYLRRVVSHP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

1.1

70.4

Major BPS

50.5

0.01

1.3

53.1

40.5

Major PPT

80.3

0.68

0.7

72.9

31.9

Minor 5ss

35.1

-1.7

3.5

51.2

45.6

Minor BPS

38.4

-0.8

2.6

55.61

46.3

Associated Gene:

Gene:

SNX1

Ensembl Gene ID:

ENSAPLG00000003989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004143

10382476 - 10392896

10421