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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10389059_10389181_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10389059 - 10389181

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

AATGTGGGAACC

Flanking Amino Acid:

MTIKMNESDIWFEEKLQEVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

77.6

0.62

0.9

74.1

35.2

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

37.6

-0.9

2.5

49.97

40.6

Associated Gene:

Gene:

SNX1

Ensembl Gene ID:

ENSAPLG00000003989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004143

10382476 - 10392896

10421