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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10394051_10394122_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10394051 - 10394122

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCAC

5'SS Class:

strong_major

3'SS Sequence:

GTCCCTGCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

GGGTGCTGATGT

Flanking Amino Acid:

RRQGLELYIQGVLCRNKELP

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.1

37.5

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

68.4

0.41

0.9

64.9

36.3

Minor 5ss

25.6

-2.8

3.1

31.9

42.9

Minor BPS

40.1

-0.6

2.2

54.16

46.8

Associated Gene:

Gene:

SNX1

Ensembl Gene ID:

ENSAPLG00000003989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048479

10391952 - 10394592

2641