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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10394218_10394384_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10394218 - 10394384

Intron Length:

167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTCTG

5'SS Class:

major

3'SS Sequence:

GGTGCAGGGACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGTCAC

U12 Branch Point Sequence:

CTGCCAGTCACG

Flanking Amino Acid:

CQQDPKGSSAPGDTTVPWCC

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.4

0.34

1.3

46.2

Major BPS

54.8

0.12

1.2

58.7

38.1

Major PPT

48.3

-0.1

1.2

38.4

43.7

Minor 5ss

34.3

-1.8

45.9

42.4

Minor BPS

38.6

-1

2.5

45.44

46.7

Associated Gene:

Gene:

SNX1

Ensembl Gene ID:

ENSAPLG00000003989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048479

10391952 - 10394592

2641