Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_10395751_10396254_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10395751 - 10396254

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACGCGG

5'SS Class:

major

3'SS Sequence:

TCCCCTACCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAC

U12 Branch Point Sequence:

TTTCCCCTACCT

Flanking Amino Acid:

GDFTRGDGTGGKSIYGDRFP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.2

51.3

46.9

Major BPS

67.4

0.43

1.3

78.4

35.2

Major PPT

0.41

0.8

66.1

28.4

Minor 5ss

30.2

-2.3

3.2

38.6

46.5

Minor BPS

0.46

86.59

38.8

Associated Gene:

Gene:

PPIB

Ensembl Gene ID:

ENSAPLG00000004432

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004550

10395354 - 10396297

944