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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1043955_1044494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1043955 - 1044494

Intron Length:

540

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCTT

5'SS Class:

strong_major

3'SS Sequence:

TATTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

TATTGTTTTACA

Flanking Amino Acid:

TVASVLVARKGNGDMAMSNI

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.8

39.8

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

86.1

0.81

0.8

80.1

37.1

Minor 5ss

-1.6

3.6

55.8

48.4

Minor BPS

55.9

0.18

2.1

71.96

40.5

Associated Gene:

Gene:

SLC24A5

Ensembl Gene ID:

ENSAPLG00000009353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009734

1036833 - 1044817

7985