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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1048262_1053001_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1048262 - 1053001

Intron Length:

4740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

AACTTGTTATTC

Flanking Amino Acid:

MGGFGVSRMGGGGMGGMNNM

Intron Amino Acid Position:

432

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

82.1

0.72

0.7

77.6

24.3

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

44.6

-0.4

2.2

52.79

39.4

Associated Gene:

Gene:

MYEF2

Ensembl Gene ID:

ENSAPLG00000008935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046975

1045531 - 1062922

17392