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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10508866_10510612_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10508866 - 10510612

Intron Length:

1747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

TGTCCCTGAATA

Flanking Amino Acid:

SQKLLKKLMAGAENSGNLDA

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.1

77.3

37.8

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

89.6

0.89

0.6

88.7

20.5

Minor 5ss

32.4

-2

2.5

39.5

Minor BPS

68.1

0.56

1.4

75.09

35.7

Associated Gene:

Gene:

TRIP4

Ensembl Gene ID:

ENSAPLG00000004612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004789

10503669 - 10531553

27885

ENSAPLT00000019303

10503669 - 10535894

32226