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Intron Name: Anas_platyrhynchos_platyrhynchos_11_10511274_10511850_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10511274 - 10511850

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GAATTCTCATGC

Flanking Amino Acid:

EDSGMAEYHSKLDETIEAIN

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.2

34.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

86.1

0.81

0.8

80.6

Minor 5ss

28.3

-2.5

3.1

31.3

36.6

Minor BPS

-0.5

1.9

49.2

40.6

Associated Gene:

Gene:

TRIP4

Ensembl Gene ID:

ENSAPLG00000004612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019303

10503669 - 10535894

32226

ENSAPLT00000004789

10503669 - 10531553

27885