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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1053200_1053392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1053200 - 1053392

Intron Length:

193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGGTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TGTCTTCTAAAT

Flanking Amino Acid:

GGGMGNMGPGGMGIDGPGFG

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.7

34.2

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

74.6

0.55

1.1

74.5

39.3

Minor 5ss

36.4

-1.5

3.3

47.9

47.8

Minor BPS

50.4

0.09

1.7

72.04

38.3

Associated Gene:

Gene:

MYEF2

Ensembl Gene ID:

ENSAPLG00000008935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046975

1045531 - 1062922

17392

ENSAPLT00000031901

1045531 - 1062922

17392

ENSAPLT00000009351

1045477 - 1062922

17446