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Intron Name: Anas_platyrhynchos_platyrhynchos_11_1053841_1054279_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

1053841 - 1054279

Intron Length:

439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTATCCTTG

5'SS Class:

strong_minor

3'SS Sequence:

AGCATTTCTTCAG|C

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

CTTGAAT

U12 Branch Point Sequence:

AGTCCTTGAATA

Flanking Amino Acid:

EQAIEAVQAISMFNGQFLFD

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.3

0.15

1.3

55.3

44.3

Major BPS

62.3

0.31

1.4

73.3

39.1

Major PPT

73.8

0.54

0.9

69.8

40.8

Minor 5ss

90.2

1.35

1.1

85.6

31.5

Minor BPS

58.3

0.26

1.4

65.17

34.7

Associated Gene:

Gene:

MYEF2

Ensembl Gene ID:

ENSAPLG00000008935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031901

1045531 - 1062922

17392

ENSAPLT00000009351

1045477 - 1062922

17446

ENSAPLT00000046975

1045531 - 1062922

17392

ENSAPLT00000038101

1045477 - 1062922

17446