Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_11_10581842_10581938_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10581842 - 10581938

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TGTAATAAAACT

Flanking Amino Acid:

DCTQHDWAPPRFCDSPTSDL

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

70.1

40.6

Major BPS

70.8

0.52

70.6

31.6

Major PPT

77.4

0.62

0.7

72.3

25.8

Minor 5ss

41.1

-1

2.8

54.5

42.5

Minor BPS

45.1

-0.2

67.56

42.7

Associated Gene:

Gene:

ZNF609

Ensembl Gene ID:

ENSAPLG00000029091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019159

10547409 - 10589691

42283